Kaleb Z. Abram

Postdoctoral Researcher

University of Arkansas for Medical Sciences

postdoc

7 h-index 19 pubs 214 cited

Research Areas

Genomics and Phylogenetic Studies Bioinformatics and Genomic Networks Microbial infections and disease research Antibiotic Resistance in Bacteria Bacterial Genetics and Biotechnology Genomic Distance-based Rapid Uncovering of Microbial Population Structures DNA as a storage medium

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OverviewAI-generated summary

Kaleb Z. Abram's research focuses on microbial genomics, with a particular emphasis on understanding the genetic diversity and antibiotic resistance mechanisms of various bacterial species. His work has investigated *Escherichia coli*, *Enterobacterales*, *Enterococcus*, and *Pseudomonas* species. Abram has explored the use of genomic surveillance to track the epidemiology and antibiotic resistance patterns of bacteria, notably in cancer patients in Arkansas. He has also contributed to developing methodologies for genomic data analysis, such as the Genomic Distance-based Rapid Uncovering of Microbial Population Structures (GRUMPS) methodology.

His collaborations include extensive work with researchers at the University of Arkansas for Medical Sciences, including Se-Ran Jun, David W. Ussery, Michael Scott Robeson, and En Huang, with whom he has co-authored multiple publications. Abram's scholarship metrics include an h-index of 7, with 19 total publications and 214 citations. His recent work also touches upon the application of DNA as a data storage medium.

Metrics

  • h-index: 7
  • Publications: 19
  • Citations: 214

Selected Publications

  • Unraveling the genomic diversity of the <i>Pseudomonas putida</i> group: exploring taxonomy, core pangenome, and antibiotic resistance mechanisms (2024) DOI
  • Leveraging nature to advance data storage: <scp>DNA</scp> as a storage medium (2023) DOI
  • Top-Down Genomic Surveillance Approach To Investigate the Genomic Epidemiology and Antibiotic Resistance Patterns of Enterococcus faecium Detected in Cancer Patients in Arkansas (2023) DOI
  • Genomic Distance-based Rapid Uncovering of Microbial Population Structures (GRUMPS): a reference free genomic data cleaning methodology (2022) DOI
  • Top-Down Genomic Surveillance Approach to Investigate the Genomic Epidemiology and Antibiotic Resistance Patterns of <i>Enterococcus faecium</i> Detected in Cancer Patients in Arkansas (2022) DOI
  • Pseudomonas aeruginosa Pangenome: Core and Accessory Genes of a Highly Resourceful Opportunistic Pathogen (2022) DOI
  • Insertion sequences and other mobile elements associated with antibiotic resistance genes in Enterococcus isolates from an inpatient with prolonged bacteraemia (2022) DOI
  • Complete Genome Sequence of a Non-Carbapenemase-Producing Carbapenem-Resistant Providencia rettgeri Strain Isolated from a Clinical Urine Sample in Arkansas (2022) DOI
  • Isolation of AmpC- and extended spectrum β-lactamase-producing Enterobacterales from fresh vegetables in the United States (2021) DOI
  • Insertion sequences associated with antibiotic resistance genes in <i>Enterococcus</i> isolates from an inpatient with prolonged bacteremia (2021) DOI
  • Mash-based analyses of Escherichia coli genomes reveal 14 distinct phylogroups (2021) DOI

Collaborators

Researchers in the database who share publications

Se-Ran Jun University of Arkansas for Medical Sciences 10 shared publications David W. Ussery University of Arkansas for Medical Sciences 2 shared publications Michael Scott Robeson University of Arkansas for Medical Sciences 2 shared publications En Huang University of Arkansas for Medical Sciences 2 shared publications Visanu Wanchai University of Arkansas for Medical Sciences 1 shared publication

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